From: JC Gumbart (gumbart_at_ks.uiuc.edu)
Date: Wed Apr 07 2010 - 07:50:07 CDT

If you're just trying to use a desktop with 4 cores, just type

 

namd2 +p4 ubq_ws_eq.conf > ubq_ws_eq.log

 

No need for charm.

 

 

From: owner-tutorial-l_at_ks.uiuc.edu [mailto:owner-tutorial-l_at_ks.uiuc.edu] On
Behalf Of leuven
Sent: Wednesday, April 07, 2010 4:35 AM
To: tutorial-l_at_ks.uiuc.edu
Subject: tutorial-l: namd could't use mutiple CPU

 

Dear Sir:
   I am a new NAMD user and I am doing the "1-2-sphere" excise. I try to run
the test using mutiple CPU by following command:

charmrun +p4 namd2 ubq_ws_eq.conf>ubq_ws_eq.log

But the terminal said:

connect to address 127.0.0.1: Connection refused
Trying 127.0.0.1...
connect to address 127.0.0.1: connect to address 127.0.0.1: Connection
refused
Trying ::1...
Connection refused
Trying 127.0.0.1...
connect to address 127.0.0.1: Connection refused
Trying ::1...

Could you please give me some advices. Thank you very much.

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