equilibration of protein

From: Dhiraj Srivastava (dhirajks_at_gmail.com)
Date: Wed Nov 01 2006 - 12:31:17 CST

Hi all
       I have equilibrated my protein for 0.2 ns and the graph of rmsd of C
alpha atoms vs. time step still looks like that in the attachment. should i
go ahead and start my production run or should i equilibrate it further?


Dhiraj Kumar Srivastava
Department of Chemistry
University of Missouri-Columbia
MO, 65211
Ph. no. 001-573-639-0153

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:42:46 CST