Simulation Using Both NAMD and VMD

From: Ajith Rathnaweera Rajapaksha Mudalige (arajapak_at_purdue.edu)
Date: Fri Apr 20 2012 - 17:05:28 CDT

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Hi Everybody,

Is it possible to write a script for a NAMD simulation to access VMD at each time step through Interactive Molecular Dynamics mode (or any other possible way).

In my simulation I need to execute some VMD commands at each time step and define a new force according to the results output from VMD.

I highly appreciate if someone could shed some light in this direction.

Regards,

Ajith

• Next message: Axel Kohlmeyer: "Re: Simulation Using Both NAMD and VMD"
• Previous message: Ramya Gamini: "Re: What is the means of system-min.conf in the Residue-Based Coarse tutorial?"
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• Reply: Axel Kohlmeyer: "Re: Simulation Using Both NAMD and VMD"
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