TITLE: Contact Scoring

EXECUTABLES TESTED:  
	dock6

FUNCTIONS TESTED:
	Minimization Parameters
	
WALL CLOCK TIME:
	  secs

FILES USED:
	minimize1.dockin	#minimization turned on but no to all other questions
	minimize2.dockin	#final_pose_minimization
    	minimize3.dockin	#anchor_pose_minimization
	minimize4.dockin        #growth_minimization
        minimize5.dockin        #advanced_simplex_parameters
        minimize6.dockin        #include_internal_energy
	lig.mol2		#ligand structure file
	struct.sph		#receptor sphere file
	chem.defn		#chem parameter input file
	flex.defn		#flex atom definition file
	flex_drive.tbl		#flex torsional drive file
	vdw.defn		#vdw parameter file used to create grid

	../grid_generation/	
		grid.bmp	#bump grid
		grid.nrg	#energy grid

FILES GENERATED:
	XXX_scored.mol2		#best scoring pose from input file	

NOTE:  grid_generation must be run first
