Running solvate with arguments: 1qhj_water.psf orient.pdb -rotate -t 20 -o 1qhj_water_solvated New volume is 601170.6431238041 The system was rotated by 340.0 degrees around Z axis and 350.0 degrees around X axis. generating solute plus one replica of water... generating water residue lists... single water residue type, creating residue list... replicating 8 water segments, 2 by 2 by 2 Solvate completed successfully.