From: Christian Blouin (cblouin_at_cs.dal.ca)
Date: Fri Nov 02 2007 - 08:12:51 CDT
Greetings,
We are attempting to apply the RMSD for individual residues
(NAMD tutorial) on a protein that has two residues with negative indexes.
The line:
rmsd_residue_over_time top $sel_resid
fails with the message:
Calculating rmsd for frame 0
Atomselect: cannot parse selection text: protein and resid -2
and noh
Can anyone on this list help us understand the nature of this
problem and how to get around it.
Thanks,
Christian
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