CollectionMaster::CollectVectorInstance Class Reference

#include <CollectionMaster.h>

Inheritance diagram for CollectionMaster::CollectVectorInstance:

Public Member Functions
	CollectVectorInstance (void)
	CollectVectorInstance (int s)
void	free ()
int	notfree ()
void	reset (int s)
void	append (CollectVectorMsg *msg, int max_index)
int	ready (void)

Public Attributes
int	seq
Lattice	lattice
ResizeArray< Vector >	data
ResizeArray< FloatVector >	fdata
int	remaining

Detailed Description

Definition at line 194 of file CollectionMaster.h.

Constructor & Destructor Documentation

CollectVectorInstance() [1/2]

CollectionMaster::CollectVectorInstance::CollectVectorInstance ( void  )

inline

Definition at line 198 of file CollectionMaster.h.

: seq(-10) { ; }

CollectVectorInstance() [2/2]

CollectionMaster::CollectVectorInstance::CollectVectorInstance ( int  s )

inline

Definition at line 200 of file CollectionMaster.h.

References reset().

{ reset(s); }

Member Function Documentation

append()

void CollectionMaster::CollectVectorInstance::append ( CollectVectorMsg *  msg, int  max_index  )

inline

Definition at line 214 of file CollectionMaster.h.

References CollectVectorMsg::aid, CollectVectorMsg::aid_size, ResizeArray< Elem >::begin(), CollectVectorMsg::data, data, CollectVectorMsg::data_size, CollectVectorMsg::fdata, fdata, CollectVectorMsg::fdata_size, remaining, and ResizeArray< Elem >::resize().

    {
      AtomID *a = msg->aid;
      Vector *d = msg->data;
      FloatVector *fd = msg->fdata;
      int size = msg->aid_size;
      if ( msg->data_size ) {
        data.resize(max_index);
        Vector *ptr = data.begin();
        for( int i = 0; i < size; ++i ) { ptr[a[i]] = d[i]; }
      }
      if ( msg->fdata_size ) {
        fdata.resize(max_index);
        FloatVector *ptr = fdata.begin();
        for( int i = 0; i < size; ++i ) { ptr[a[i]] = fd[i]; }
      }
      --remaining;
    }

free()

void CollectionMaster::CollectVectorInstance::free ( )

inline

Definition at line 202 of file CollectionMaster.h.

References seq.

Referenced by CollectionMaster::disposeForces(), CollectionMaster::disposePositions(), CollectionMaster::disposeVelocities(), CollectionMaster::startNextRoundOutputForce(), CollectionMaster::startNextRoundOutputPos(), and CollectionMaster::startNextRoundOutputVel().

{ seq = -10; }

notfree()

int CollectionMaster::CollectVectorInstance::notfree ( )

inline

Definition at line 203 of file CollectionMaster.h.

References seq.

Referenced by CollectionMaster::CollectVectorSequenceDcdSelection::submitData().

{ return ( seq != -10 ); }

ready()

int CollectionMaster::CollectVectorInstance::ready ( void  )

inline

Definition at line 234 of file CollectionMaster.h.

References remaining.

Referenced by CollectionMaster::CollectVectorSequenceDcdSelection::removeReady().

{ return ( ! remaining ); }

reset()

void CollectionMaster::CollectVectorInstance::reset ( int  s )

inline

Definition at line 205 of file CollectionMaster.h.

References data, fdata, NAMD_bug(), PatchMap::Object(), remaining, ResizeArray< Elem >::resize(), and seq.

Referenced by CollectVectorInstance(), and CollectionMaster::CollectVectorInstanceDcdSelection::CollectVectorInstanceDcdSelection().

                      {
        if ( s == -10 ) NAMD_bug("seq == free in CollectionMaster");
        seq = s;
        remaining = (PatchMap::Object())->numNodesWithPatches(); 
        data.resize(0);
        fdata.resize(0);
    }

Member Data Documentation

data

ResizeArray<Vector> CollectionMaster::CollectVectorInstance::data

Definition at line 239 of file CollectionMaster.h.

Referenced by append(), CollectionMaster::CollectVectorInstanceDcdSelection::append(), CollectionMaster::disposeForces(), CollectionMaster::disposePositions(), CollectionMaster::disposeVelocities(), and reset().

fdata

ResizeArray<FloatVector> CollectionMaster::CollectVectorInstance::fdata

Definition at line 240 of file CollectionMaster.h.

Referenced by append(), CollectionMaster::CollectVectorInstanceDcdSelection::append(), CollectionMaster::disposeForces(), CollectionMaster::disposePositions(), CollectionMaster::disposeVelocities(), and reset().

lattice

Lattice CollectionMaster::CollectVectorInstance::lattice

Definition at line 237 of file CollectionMaster.h.

Referenced by CollectionMaster::disposePositions(), and CollectionMaster::CollectVectorSequenceDcdSelection::removeReady().

remaining

int CollectionMaster::CollectVectorInstance::remaining

Definition at line 242 of file CollectionMaster.h.

Referenced by append(), CollectionMaster::CollectVectorInstanceDcdSelection::append(), ready(), and reset().

seq

int CollectionMaster::CollectVectorInstance::seq

Definition at line 236 of file CollectionMaster.h.

Referenced by CollectionMaster::disposeForces(), CollectionMaster::disposePositions(), CollectionMaster::disposeVelocities(), free(), notfree(), CollectionMaster::CollectVectorSequenceDcdSelection::removeReady(), reset(), CollectionMaster::startNextRoundOutputForce(), CollectionMaster::startNextRoundOutputPos(), CollectionMaster::startNextRoundOutputVel(), CollectionMaster::CollectVectorSequenceDcdSelection::submitData(), and CollectionMaster::wrapCoorFinished().

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The documentation for this class was generated from the following file:

• CollectionMaster.h