Class Index

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_	CudaPmeRealSpaceCompute	NodeProxyMgr
	CudaPmeTranspose	NodeReduction
__sort_entry	CudaPmeXInitMsg	nodesort
a	CudaPmeXYInitMsg	nonbonded
	CudaPmeXYZInitMsg	NonbondedExclValue
ABoundAngleRestraint	CudaRattleElem	notZero
ABoundDiheRestraint	CudaRattleParam	NumDevicesMsg
ABoundDistRestraint	CudaStaticAssert	o
ABoundPosRestraint	CudaStaticAssert< true >
ADiheRestraint	cudaTensor	ObjectArena
ADistRestraint	CudaThole	ofstream_namd
AFixedAngleRestraint	CudaTholeStage	OneFourNbThole
AFixedDiheRestraint	CudaTileListKernel	OneFourNbTholeElem
AFixedDistRestraint	cudaVector	Output
AFixedPosRestraint	d	OutputAtomRecord
AForcingAngleRestraint		OwnerBox
AForcingDiheRestraint	ParseOptions::DataElement	p
AForcingDistRestraint	DataExchanger
AForcingPosRestraint	DataMessage	Pairlists
AGroup	datastream	PairTable
ALambdaControl	DataStreamMsg	PAL
ALambdaManager	dcd_params	ParallelIOMgr
AlchData	DeviceBuffer	Parameters
Alg7	DeviceCUDA	ParseOptions
AlgNbor	DeviceDataMsg	Patch
AlgRecBisection	dihedral	patch_sortop_curve_a
AlignVector	dihedral_params	patch_sortop_curve_b
Ambertoppar	DihedralElem	patch_sortop_curve_c
Ambertoppar (AmberParm7Reader)	DihedralTable	PatchData
AnAngleRestraint	DihedralValue	PatchData (msm)
angle	DLLoader (dlloader)	PatchDataSOA
angle_params	DLLoaderInterface (dlloader)	patchDataStrc
AngleElem	doublecomplex	PatchDiagram (msm)
AngleTable	drude_constants	PatchElem
AngleValue	dummyData	PatchInfo
aniso	e	patchInfo
AnisoElem		PatchLevelPmeData
APosRestraint	eABF	PatchMap
ARestraint	eABF1D	PatchMapMsg
ARestraintManager	eABF2D	PatchMgr
Array (msm)	CudaPmeOneDevice::EnergyVirial	PatchPairRecord
Array	Entry	PatchProxyListMsg
assert_ProxyResultVarsizeMsg	EntryGlob	ComputeMap::PatchRec
atom_constants	EwaldParticle	CudaComputeNonbonded::PatchRecord
atom_name_info	ExchangeAtomsMsg	PatchRecord
AtomCoord (msm)	ExchangeAtomsReqMsg	PatchSend (msm)
AtomCstInfo	ExclElem	Rebalancer::pcpair
atomData	ExclSigInfo	PDB
atomID_less	Exclusion	PDBAtom
AtomMap	ExclusionCheck	PDBAtomRecord
AtomMapper	ExclusionSignature	PDBData
AtomNameIdx	exlist_sortop	PDBHetatm
AtomsCntPerPatchMsg	ExtCoordMsg	PDBUnknown
AtomSigInfo	ExtForce	pe_sortop_bit_reversed
AtomSignature	ExtForceMsg	WorkDistrib::pe_sortop_compact
AtomTable	f	pe_sortop_coord_x
AVector		pe_sortop_coord_y
b	FFTCompute	WorkDistrib::pe_sortop_diffuse
	FileStack	TopoManagerWrapper::pe_sortop_topo
BackEnd	FinishWorkMsg	per_atom_flags
BasicAtomInfo	Flags	pid_sortop_reverse_priority
BlockDiagram (msm)	floatcomplex	PluginIOMgr
BlockIndex (msm)	OutputAtomRecord::floatVals	PmeAckMsg
BlockSend (msm)	FloatVector	PmeAtomFiler
BOCgroup	FmmSerialCoordMsg	PmeAtomMsg
BOID	FmmSerialForceMsg	PmeAtomPencilMsg
bond	FoldFactor (msm)	PmeAtomStorage
bond_params	FortranData (AmberParm7Reader)	PmeBlockMsg
ComputeBondedCUDAKernel::BondedVirial	FortranFormatSpecifier (AmberParm7Reader)	PmeDoneMsg
BondElem	four_body_consts	PmeEvirMsg
BondTable	FullAtom	PmeForceMsg
BondValue	g	PmeForcePencilMsg
BoundingBox		PmeGrid
Box	GBISCoordMsg	PmeGridMsg
BroadcastClient	GBISForceMsg	PmeKSpace
BroadcastClientElem	GBISParamStruct	PmeKSpaceCompute
BroadcastMgr	GenericAngle	PmeLaunchMsg
BroadcastMsg	GenericAtom	PmeParticle
c	GenericBond	PmePencil
	GenericDihedral	PmePencilInitMsg
C1Matrix	GenericMol	PmePencilInitMsgData
C1Vector	GlobalGPUMgr	PmePencilMap
Controller::checkpoint	GlobalMaster	PmePencilX
HomePatch::checkpoint_t	GlobalMasterEasy	PmePencilXMap
CheckpointAtomsMsg	GlobalMasterFreeEnergy	PmePencilXY
CheckpointAtomsReqMsg	GlobalMasterIMD	PmePencilXYMap
CheckpointMsg	GlobalMasterMisc	PmePencilXYZ
CheckStep	GlobalMasterServer	PmePencilXYZMap
CkPrintf_stringbuf	GlobalMasterSMD	PmePencilY
ClusterCoorElem	GlobalMasterSymmetry	PmePencilZ
ClusterCoorMsg	GlobalMasterTcl	PmeRealSpace
ClusterElem	GlobalMasterTest	PmeRealSpaceCompute
ClusterSizeMsg	GlobalMasterTMD	PmeRunMsg
CollectionMaster	GMWakeMsg	PmeSharedTransMsg
CollectionMgr	go_pair	PmeSharedUntransMsg
CollectiveDeviceBuffer	go_val	PmeStartMsg
CollectLoadsMsg	Grid (msm)	PmeTransMsg
CollectProxyVectorInstance	GridFixed (msm)	PmeTranspose
CollectProxyVectorSequence	GridforceFullBaseGrid	PmeUntransMsg
CollectionMgr::CollectVectorInstance	GridforceFullMainGrid	PmeXPencil
CollectionMaster::CollectVectorInstance	GridforceFullSubGrid	PmeYPencil
CollectionMaster::CollectVectorInstanceDcdSelection	GridforceGrid	PmeZPencil
CollectVectorMsg	GridforceLiteGrid	pntChrgDist
CollectionMgr::CollectVectorSequence	GridforceFullBaseGrid::GridIndices	Pointer
CollectionMaster::CollectVectorSequence	GridMsg	position_index
CollectionMaster::CollectVectorSequenceDcdSelection	GroGaussPair	PressureProfileReduction
CollectVectorVarMsg	GroLJPair	PriorityQueue (msm)
colvarproxy_namd	gromacsPair	processorInfo
Communicate	GromacsPairElem	ProxyCombinedResultMsg
CompAtom	GromacsPairValue	ProxyCombinedResultRawMsg
CompAtomExt	GromacsTopFile	ProxyDataMsg
CompAtomExtCopy	GroupInitMsg	ProxyElem
Compute	GroupRestraintList	ProxyGBISP1ResultMsg
ComputeAngles	GroupRestraintParam	ProxyGBISP2DataMsg
ComputeAniso	h	ProxyGBISP2ResultMsg
ComputeBondedCUDAKernel		ProxyGBISP3DataMsg
ComputeBonds	HashPool	ProxyListInfo
ComputeConsForce	HashPoolAdaptorT	ProxyMgr
ComputeConsForceMsg	HashReal	ProxyNodeAwareSpanningTreeMsg
ComputeConsTorque	HashString	ProxyPatch
ComputeCrossterms	heapIterator	ProxyResultMsg
ComputeCUDAMgr	heapRecord	ProxyResultVarsizeMsg
ComputeCylindricalBC	HomePatch	ProxySpanningTreeMsg
ComputeMap::ComputeData	HomePatchElem	ProxyTree
ComputeDihedrals	HydroBasedMsg	proxyTreeNode
ComputeDPMEDataMsg	HydrogenGroupID	ProxyUsage
ComputeDPMEResultsMsg	i	ProxyUsageKey
ComputeEField		q
ComputeEwald	idIndxStr
ComputeEwaldMsg	ijpair	QMAtomData
ComputeExcls	ijpair_sortop_bit_reversed	QMCoordMsg
ComputeExt	IMDBox	QMForce
ComputeExtAtom	IMDEnergies	QMForceMsg
ComputeExtMgr	IMDheader	QMGrpCalcMsg
ComputeFmmSerial	IMDOutput	QMGrpResMsg
ComputeFmmSerialAtom	IMDSessionInfo	QMPntChrgMsg
ComputeFmmSerialMgr	IMDTime	qmSolvData
ComputeFullDirect	improper	r
ComputeGBISAtom	improper_params
ComputeGBISser	ImproperElem	Random
ComputeGBISserMgr	ImproperValue	HomePatch::RattleList
ComputeGlobal	indexed_nbthole_pair	RattleParam
ComputeGlobalDataMsg	indexed_table_pair	Rebalancer
ComputeGlobalResultsMsg	indexed_vdw_pair	RecBisection
ComputeGridForce	indexed_vdw_pair_accel	RecvDeviceMsg
ComputeGromacsPair	IndexFile	ReductionMgr
ComputeHomePatch	IndexRange (msm)	ReductionRegisterMsg
ComputeHomePatches	InfoRecord	ReductionSet
ComputeHomeTuples	infostream	ReductionSetData
ComputeImpropers	InitDeviceMsg	ReductionSubmitMsg
computeInfo	InitDeviceMsg2	ReductionValue
ComputeLCPO	InputAtom	RefineOnly
ComputeLjPmeSerial	Int2	RefineTorusLB
ComputeLjPmeSerialMgr	Int3	refSelStr
ComputeLonepairsCUDA	OutputAtomRecord::integerVals	RegisterPatchMsg
ComputeMap	InterpParams_t	RegisterProxyMsg
ComputeMapChangeMsg	intpair	ReplicaDcdAckMsg
ComputeMgr	IRSet	ReplicaDcdDataMsg
ComputeMoa	isEmpty	ReplicaDcdInitMsg
ComputeMsm	isWater	RequireReduction
ComputeMsmMgr	Iterator	RequireReductionCharm
ComputeMsmSerial	Ivec (msm)	RequireReductionShared
ComputeMsmSerialAtom	l	ResidueLookupElem
ComputeMsmSerialMgr		ResizeArray
ComputeNonbondedPair	LargeIRSet	ResizeArrayIter
ComputeNonbondedSelf	Lattice	ResizeArrayPrimIter
ComputeNonbondedUtil	LCPOAtom	ResizeArrayRaw
ComputeNonbondedWorkArrays	LCPONeighborList	Results
ComputeOneFourNbThole	LdbCoordinator	RunningAverage
ComputePatch	LdbMigrateMsg	RunWithAffinity
ComputePatchPair	LincsSolver	s
ComputePme	listNode
ComputePmeCUDA	LjPmeCompute	ScriptParamMsg
ComputePmeCUDADevice	LjPmeGrid	ScriptTcl
ComputePmeCUDAMgr	LjPmeKSpace	seg_resid
ComputePmeMgr	LjPmeMgr	Sequencer
ComputePmeUtil	LjPmeRealSpace	SetLatticeMsg
ComputeQM	LjPmeSerialAtom	SettleParameters
ComputeQMAtom	LjPmeSerialCoordMsg	OutputAtomRecord::shortVals
ComputeQMMgr	LjPmeSerialForceMsg	SimParameters
ComputeQMPntChrg	LJTable	SimpleBroadcastObject
CudaComputeNonbonded::ComputeRecord	LocalID	ScriptTcl::SimpleBroadcastObjectWrapper
ComputeRestraints	localIDResult	SlaveInitMsg
ComputeSelfAngles	LocalLBInfoMsg	SortableResizeArray
ComputeSelfAniso	LocalPmeInfo	SortedArray
ComputeSelfBonds	LocalWorkMsg	sortop_base
ComputeSelfCrossterms	ComputeLonepairsCUDA::LonepairBisector	sortop_bit_reversed
ComputeSelfDihedrals	ComputeLonepairsCUDA::LonepairColinear	sortop_SOA
ComputeSelfExcls	ComputeLonepairsCUDA::LonepairRelative	sortop_x
ComputeSelfGromacsPair	lphost	sortop_y
ComputeSelfImpropers	LSSDataStr	sortop_z
ComputeSelfOneFourNbThole	lssDistSort	sparseMatrix
ComputeSelfThole	LSSSubsDat	SplitComputesMsg
ComputeSelfTuples	m	StreamMessage
ComputeSphericalBC		StringList
ComputeStir	main	SubmitReduction
ComputeTclBC	Map (msm)	SubmitReductionCharm
ComputeThole	MathArray	SubmitReductionShared
ConfigList	Matrix4	Sync
ConfigList::ConfigListNode	Matrix4Symmetry	SynchronousCollectives
ConstPointer	Matrix4TMD	SynchronousCollectivesMulticastMsg
constraintTuple	maxHeap	t
Controller	Measure
ControllerBroadcasts	meMMQMGrp	table_pair_params
ControllerState	memusageinit	LJTable::TableEntry
cptr_sortop_priority	MGridforceParams	TaggedMsg
CpuPmeAtomStorage	MGridforceParamsList	Tensor
cr_sortop_distance	MigrateAtomsCombinedMsg	thole
cr_sortop_reverse_priority	MigrateAtomsMsg	TholeElem
crossterm	MigrationInfo	TileExcl
crossterm_params	minHeap	TileList
CrosstermData	minpoint	TileListStat
CrosstermElem	MIStream	TileListVirialEnergy
CrosstermValue	MoaData	TopoManagerWrapper
Controller::CthThreadWrapper	Molecule	TorusLB
cuda_args_t	MolInfoMsg	Transform
ComputePmeMgr::cuda_submit_charges_args	MolInst	TransposeBatch
CudaAlchFlags	MOStream	TupleCounts
CudaAlchLambdas	MoveAllByMsg	TupleData
CudaAlchParameters	MoveAtomMsg	TupleDataStage
CudaAngle	MoveInputAtomsMsg	TupleDataStagePeer
CudaAngleStage	MovePatch	TupleIntArrays
CudaAngleValue	MovePatchAtomsMsg	TupleIntArraysContiguous
CudaAniso	MovePatchesMsg	TupleIntArraysPeer
CudaAnisoStage	MovingAverage	TuplePatchElem
CudaAtom	MsmBlock	TupleSignature
CudaBond	MsmBlockKernel	TupleSizes
CudaBondStage	MsmBlockMap	TupleStrider
CudaBondValue	MsmBlockProxyMsg	TupleString
CudaComputeGBISKernel	MsmC1HermiteBlock	TupleStringHash
CudaComputeNonbonded	MsmC1HermiteBlockProxyMsg	TwoLevelParam
CudaComputeNonbondedKernel	MsmC1HermiteGridCutoff	u
CudaComputeNonbondedMsg	MsmC1HermiteGridCutoffProxyMsg
CudaComputeRecord	MsmC1HermiteGridCutoffSetupMsg	UniqueSet
CudaCrossterm	MsmGridCutoff	UniqueSetIter
CudaCrosstermStage	MsmGridCutoffInitMsg	UniqueSetRaw
CudaCrosstermValue	MsmGridCutoffKernel	UniqueSortedArray
CudaDihedral	MsmGridCutoffMap	UnregisterProxyMsg
CudaDihedralStage	MsmGridCutoffProxyMsg	v
CudaDihedralValue	MsmGridCutoffSetupMsg
CudaExclusion	MsmInitMsg	validRattle
CudaExclusionStage	MsmProfiler	vdw_pair_params
CudaFFTCompute	MsmSerialCoordMsg	vdw_params
CudaForce	MsmSerialForceMsg	vdw_val
CudaGlobalMasterClient (CudaGlobalMaster::CUDAGM_NS)	MsmTimer	VDWTable
CudaGlobalMasterServer	MStringStrider	vect
CudaLocalRecord	MultiString	Vector
CudaMInfo	n	VirialEnergy
CudaNBConstants		vmdforce
CudaNonbondedTables	NamdCentLB	w
CudaOneFourNbThole	NamdDummyLB
CudaOneFourNbTholeStage	NamdHybridLB	wkf_timer
CudaPatchRecord	NamdProfileEvent	wkfmsgtimer
CudaPeerRecord	NamdState	WorkDistrib
CudaPmeAtomStorage	nbthole_pair_params	WorkIndex
CudaPmeKSpaceCompute	nbthole_pair_value	x
CudaPmeOneDevice	netint
CudaPmePencilX	NL_Msm_t	XXH32_canonical_t
CudaPmePencilXY	Node	XXH64_canonical_t
CudaPmePencilXYZ	NodeBroadcast	z
CudaPmePencilY	NodePmeInfo
CudaPmePencilZ	NodePmeMgr	zVector

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