| as_vector() const | colvarmodule::quaternion | [inline] |
| conjugate() const | colvarmodule::quaternion | [inline] |
| cosine(cvm::quaternion const &q) const | colvarmodule::quaternion | [inline] |
| dist2(cvm::quaternion const &Q2) const | colvarmodule::quaternion | [inline] |
| dist2_grad(cvm::quaternion const &Q2) const | colvarmodule::quaternion | [inline] |
| from_simple_string(std::string const &s) | colvarmodule::quaternion | |
| get_vector() const | colvarmodule::quaternion | [inline] |
| inner(cvm::quaternion const &Q2) const | colvarmodule::quaternion | [inline] |
| match(cvm::quaternion &Q2) const | colvarmodule::quaternion | [inline] |
| norm() const | colvarmodule::quaternion | [inline] |
| norm2() const | colvarmodule::quaternion | [inline] |
| operator *(cvm::quaternion const &h, cvm::quaternion const &q) | colvarmodule::quaternion | [friend] |
| operator *(cvm::real c, cvm::quaternion const &q) | colvarmodule::quaternion | [friend] |
| operator *(cvm::quaternion const &q, cvm::real c) | colvarmodule::quaternion | [friend] |
| operator *=(cvm::real a) | colvarmodule::quaternion | [inline] |
| operator+(cvm::quaternion const &h, cvm::quaternion const &q) | colvarmodule::quaternion | [friend] |
| operator+=(cvm::quaternion const &h) | colvarmodule::quaternion | [inline] |
| operator-(cvm::quaternion const &h, cvm::quaternion const &q) | colvarmodule::quaternion | [friend] |
| operator-=(cvm::quaternion const &h) | colvarmodule::quaternion | [inline] |
| operator/(cvm::quaternion const &q, cvm::real c) | colvarmodule::quaternion | [friend] |
| operator/=(cvm::real a) | colvarmodule::quaternion | [inline] |
| operator<<(std::ostream &os, cvm::quaternion const &q) | colvarmodule::quaternion | [friend] |
| operator>>(std::istream &is, cvm::quaternion &q) | colvarmodule::quaternion | [friend] |
| operator[](int i) | colvarmodule::quaternion | [inline] |
| operator[](int i) const | colvarmodule::quaternion | [inline] |
| output_width(size_t real_width) | colvarmodule::quaternion | [inline, static] |
| position_derivative_inner(cvm::rvector const &pos, cvm::rvector const &vec) const | colvarmodule::quaternion | |
| q0 | colvarmodule::quaternion | |
| q1 | colvarmodule::quaternion | |
| q2 | colvarmodule::quaternion | |
| q3 | colvarmodule::quaternion | |
| quaternion(cvm::real x, cvm::real y, cvm::real z) | colvarmodule::quaternion | [inline] |
| quaternion(cvm::real const qv[4]) | colvarmodule::quaternion | [inline] |
| quaternion(cvm::real q0i, cvm::real q1i, cvm::real q2i, cvm::real q3i) | colvarmodule::quaternion | [inline] |
| quaternion(cvm::vector1d< cvm::real > const &v) | colvarmodule::quaternion | [inline] |
| quaternion() | colvarmodule::quaternion | [inline] |
| reset() | colvarmodule::quaternion | [inline] |
| reset_rotation() | colvarmodule::quaternion | [inline] |
| rotate(cvm::rvector const &v) const | colvarmodule::quaternion | [inline] |
| rotate(cvm::quaternion const &Q2) const | colvarmodule::quaternion | [inline] |
| rotation_matrix() const | colvarmodule::quaternion | [inline] |
| set(cvm::real value) | colvarmodule::quaternion | [inline] |
| set_from_euler_angles(cvm::real phi_in, cvm::real theta_in, cvm::real psi_in) | colvarmodule::quaternion | [inline] |
| set_positive() | colvarmodule::quaternion | [inline] |
| to_simple_string() const | colvarmodule::quaternion | |