| _get_keyval_scalar_(std::string const &conf, char const *key, TYPE &value, TYPE const &def_value, Parse_Mode const &parse_mode) | colvarparse | [protected] |
| _get_keyval_scalar_novalue_(std::string const &key_str, TYPE &value, Parse_Mode const &parse_mode) | colvarparse | [protected] |
| _get_keyval_scalar_novalue_(std::string const &key_str, bool &value, Parse_Mode const &parse_mode) | colvarparse | |
| _get_keyval_scalar_value_(std::string const &key_str, std::string const &data, TYPE &value, TYPE const &def_value) | colvarparse | [protected] |
| _get_keyval_scalar_value_(std::string const &key_str, std::string const &data, bool &value, bool const &) | colvarparse | |
| _get_keyval_vector_(std::string const &conf, char const *key, std::vector< TYPE > &values, std::vector< TYPE > const &def_values, Parse_Mode const &parse_mode) | colvarparse | [protected] |
| add_keyword(char const *key) | colvarparse | [protected] |
| allowed_keywords | colvarparse | [protected] |
| check_ascii(std::string const &conf) | colvarparse | [static] |
| check_braces(std::string const &conf, size_t const start_pos) | colvarparse | [static] |
| check_keywords(std::string &conf, char const *key) | colvarparse | |
| clear() | colvarparse | |
| clear_keyword_registry() | colvarparse | |
| colvarparams() | colvarparams | [protected] |
| colvarparse() | colvarparse | |
| colvarparse(const std::string &conf) | colvarparse | |
| config_string | colvarparse | [protected] |
| data_begin_pos | colvarparse | [protected] |
| data_end_pos | colvarparse | [protected] |
| error_key_required(std::string const &key_str, Parse_Mode const &parse_mode) | colvarparse | [protected] |
| get_config() const | colvarparse | [inline] |
| get_key_string_multi_value(std::string const &conf, char const *key, std::vector< std::string > &data) | colvarparse | [protected] |
| get_key_string_value(std::string const &conf, char const *key, std::string &data) | colvarparse | [protected] |
| get_keyval(std::string const &conf, char const *key, int &value, int const &def_value=(int) 0, Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, size_t &value, size_t const &def_value=(size_t) 0, Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, long &value, long const &def_value=0, Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, cvm::step_number &value, cvm::step_number const &def_value=0, Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, std::string &value, std::string const &def_value=std::string(""), Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, cvm::real &value, cvm::real const &def_value=(cvm::real) 0.0, Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, cvm::rvector &value, cvm::rvector const &def_value=cvm::rvector(), Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, cvm::quaternion &value, cvm::quaternion const &def_value=cvm::quaternion(), Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, colvarvalue &value, colvarvalue const &def_value=colvarvalue(colvarvalue::type_notset), Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, bool &value, bool const &def_value=false, Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, std::vector< int > &values, std::vector< int > const &def_values=std::vector< int >(0,(int) 0), Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, std::vector< size_t > &values, std::vector< size_t > const &def_values=std::vector< size_t >(0,(size_t) 0), Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, std::vector< long > &values, std::vector< long > const &def_values=std::vector< long >(0,(long) 0), Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, std::vector< std::string > &values, std::vector< std::string > const &def_values=std::vector< std::string >(0, std::string("")), Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, std::vector< cvm::real > &values, std::vector< cvm::real > const &def_values=std::vector< cvm::real >(0,(cvm::real) 0.0), Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, std::vector< cvm::rvector > &values, std::vector< cvm::rvector > const &def_values=std::vector< cvm::rvector >(0, cvm::rvector()), Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, std::vector< cvm::quaternion > &values, std::vector< cvm::quaternion > const &def_values=std::vector< cvm::quaternion >(0, cvm::quaternion()), Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_keyval(std::string const &conf, char const *key, std::vector< colvarvalue > &values, std::vector< colvarvalue > const &def_values=std::vector< colvarvalue >(0, colvarvalue(colvarvalue::type_notset)), Parse_Mode const parse_mode=parse_normal) | colvarparse | |
| get_param(std::string const ¶m_name) | colvarparams | [virtual] |
| get_param_grad_names() | colvarparams | [virtual] |
| get_param_grad_ptr(std::string const ¶m_name) | colvarparams | [virtual] |
| get_param_names() | colvarparams | [virtual] |
| get_param_ptr(std::string const ¶m_name) | colvarparams | [virtual] |
| getline_nocomments(std::istream &is, std::string &s) | colvarparse | [static] |
| key_already_set(std::string const &key_str) | colvarparse | [protected] |
| key_lookup(std::string const &conf, char const *key, std::string *data=NULL, size_t *save_pos=NULL) | colvarparse | |
| key_not_set enum value | colvarparse | [protected] |
| key_set_default enum value | colvarparse | [protected] |
| key_set_mode enum name | colvarparse | [protected] |
| key_set_modes | colvarparse | [protected] |
| key_set_user enum value | colvarparse | [protected] |
| keyword_delimiters_left | colvarparse | [protected] |
| keyword_delimiters_right | colvarparse | [protected] |
| mark_key_set_default(std::string const &key_str, TYPE const &def_value, Parse_Mode const &parse_mode) | colvarparse | [protected] |
| mark_key_set_user(std::string const &key_str, TYPE const &value, Parse_Mode const &parse_mode) | colvarparse | [protected] |
| param_exists(std::string const ¶m_name) | colvarparams | |
| param_grad_map | colvarparams | [protected] |
| param_map | colvarparams | [protected] |
| parse_deprecated enum value | colvarparse | |
| parse_deprecation_warning enum value | colvarparse | |
| parse_echo enum value | colvarparse | |
| parse_echo_default enum value | colvarparse | |
| Parse_Mode enum name | colvarparse | |
| parse_normal enum value | colvarparse | |
| parse_null enum value | colvarparse | |
| parse_override enum value | colvarparse | |
| parse_required enum value | colvarparse | |
| parse_restart enum value | colvarparse | |
| parse_silent enum value | colvarparse | |
| read_config_line(std::istream &is, std::string &line) | colvarparse | |
| register_param(std::string const ¶m_name, void *param_ptr) | colvarparams | [protected] |
| register_param_grad(std::string const ¶m_name, colvarvalue *param_grad_ptr) | colvarparams | [protected] |
| set_param(std::string const ¶m_name, void const *new_value) | colvarparams | [virtual] |
| set_string(std::string const &conf) | colvarparse | |
| split_string(const std::string &data, const std::string &delim, std::vector< std::string > &dest) | colvarparse | [static] |
| strip_values(std::string &conf) | colvarparse | [protected] |
| to_lower_cppstr(std::string const &in) | colvarparse | [inline, static] |
| white_space | colvarparse | [static] |
| ~colvarparams() | colvarparams | [protected, virtual] |
| ~colvarparse() | colvarparse | [virtual] |
