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Tutorial-l Mailing List

From: Sridhar Kumar Kannam (srisriphy_at_gmail.com)
Date: Mon Jan 06 2014 - 07:19:48 CST

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Hi All,

After loading the electrostatic map (.dx) file generated using PME plugin,
with slice axis X or Y the colours on the map does not change. But if we
choose Z axis to be the slice axis, with rotating the molecule, the colours
on the map are changing. However, this does not effect the colour scale
bar. I don't understand this. Is it not an inconsistency. How does one
choose this rotation to represent the potential in XY plane ?

Could you please explain this ?

-- 
Cheers !!!
Sridhar  Kumar Kannam :)
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• Next message: Monika Sharma: "Question regarding loss of translational entropy calculation in FEP tutorial"
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