VMD-L Mailing List
From: Dong Xu (d1xu_at_ucsd.edu)
Date: Fri Oct 03 2008 - 10:10:16 CDT
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Hi,
How do I calculate pairwise RMSD on a set of PDBs in which the
proteins have slight different number of atoms? I aligned them using
MultiSeq Stamp structural alignment, but couldn't figure out the
pairwise RMSD. I thought it used to be in MultiSeq, but not anymore?
Thanks,
-DX
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