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From: Axel Kohlmeyer (akohlmey_at_gmail.com)
Date: Mon May 23 2011 - 11:11:52 CDT
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On Mon, May 23, 2011 at 11:13 AM, maria goranovic
<mariagoranovic_at_gmail.com> wrote:
> Hi All
> I am trying to read a gromacs .xtc file containing 11 frames into vmd using
> the following:
> mol load gro temp.gro
> mol addfile {temp.xtc} type {xtc} first 0 last -1 step 1 waitfor 1 0
> animate style loop
> set nframes [molinfo 0 get numframes]
> puts "the number of frames is $nframes"
>
> However, nframes is only 5? On the GUI, VMD can see 11 frames, but why is
> nframes output as 5 ?
which version of VMD?
try using "waitfor all" instead of "waitfor 1".
the latter will not wait until all frames are
read in. so you have a race condition and
thus $nframes has only the current value.
axel.
> --
> Maria G.
> Technical University of Denmark
> Copenhagen
>
-- Dr. Axel Kohlmeyer akohlmey_at_gmail.com http://goo.gl/1wk0 Institute for Computational Molecular Science Temple University, Philadelphia PA, USA.
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