VMD-L Mailing List
From: John Stone (johns_at_ks.uiuc.edu)
Date: Mon Oct 27 2003 - 15:50:51 CST
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Hi,
You can use the "ramaplot" tool in the "extensions" menu to make
Ramachandran plots. Just select the molecule you want to plot, and
it will draw it interactively. You can also select the plotted points
to see what parts of your structure they correspond to.
Thanks,
John Stone
vmd_at_ks.uiuc.edu
On Mon, Oct 27, 2003 at 01:26:36PM -0500, Madhuri Agashe wrote:
> Can I use VMD to get Ramachandran plots? How?
>
> Madhuri Agashe
> Graduate Research Assistant,
> Dept. of Bioengineering,
> Clemson University,
> Clemson, SC 29631
> Phone: 864-653-4230 (resi)
> 864-656-1352 (off.)
>
-- NIH Resource for Macromolecular Modeling and Bioinformatics Beckman Institute for Advanced Science and Technology University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801 Email: johns_at_ks.uiuc.edu Phone: 217-244-3349 WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078
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