VMD-L Mailing List
From: Chitrak Gupta (chgupta_at_mix.wvu.edu)
Date: Fri Feb 03 2017 - 10:45:02 CST
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Hi Priti,
The hbonds plugin allows you to define a "selection 1" and "selection 2".
You could select the two monomers as selections 1 and 2 respectively. If
you want the detailed information, make sure you select the "All hbonds" in
the "Calculate detailed info for:" option, and check the "Write output
files?" option.
Hope this helps,
Chitrak.
On Fri, Feb 3, 2017 at 12:58 AM, PRITI ROY <priitii.roy_at_gmail.com> wrote:
> Dear all,
> I am a beginner in this field. I want to know the only interacting h-bond between the dimer of protein. I used H-bond plugin but it shows all bonding. I wanted to know the interacting backbone-backbone, backbone-sidechain, sidechain-sidechain h-bond between the dimer.
>
> Thanks,
> Priti Roy
>
>
- Next message: Chitrak Gupta: "Re: Interacting H-bond between two dimer"
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- In reply to: PRITI ROY: "Interacting H-bond between two dimer"
- Next in thread: Chitrak Gupta: "Re: Interacting H-bond between two dimer"
- Maybe reply: Chitrak Gupta: "Re: Interacting H-bond between two dimer"
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