VMD-L Mailing List
From: John Stone (johns_at_ks.uiuc.edu)
Date: Wed Mar 22 2006 - 10:23:41 CST
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Hi,
The VMD DCD plugin (as well as the others) is made available
with the UIUC Open Source license, so you can just use our DCD
reader code if you like. Even if you prefer to write your own,
you might save yourself a lot of time and energy by reading ours:
http://www.ks.uiuc.edu/Research/vmd/plugins/doxygen/dcdplugin_8c.html
The source is available by CVS if you're interested.
John Stone
vmd_at_ks.uiuc.edu
On Thu, Mar 23, 2006 at 12:16:44AM +0800, Lin wrote:
> Hi all,
>
> I am writing a dcd file reader, i can successfully read
> in the atoms into my system, however i am not able to
> categorise the atoms into different frames/timestep. Does
> anyone has any idea why? Also, my simulation is supposed
> to contain fixed atoms. However, after reading the
> header, my nfixed atoms variable is found to be 0. Does
> anybody have any idea why? My dcd file is generated with
> NAMD Version 2.6b1.
>
> thanks a lot!
>
>
>
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-- NIH Resource for Macromolecular Modeling and Bioinformatics Beckman Institute for Advanced Science and Technology University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801 Email: johns_at_ks.uiuc.edu Phone: 217-244-3349 WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078
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