Tutorial-l Mailing List
From: Anna Dejardin (anna.dejardin_at_ucl.ac.uk)
Date: Fri May 15 2009 - 08:34:15 CDT
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Hi Peter,
Here is the logfile:
Charm++> Running on MPI version: 1.2 multi-thread support: 1/0
Charm warning> Randomization of stack pointer is turned on in Kernel,
run 'echo 0 > /proc/sys/kernel/randomize_va_space' as root to disable
it. Thread migration may not work!
Info: NAMD 2.6 for Linux-amd64-MPI
Info:
Info: Please visit http://www.ks.uiuc.edu/Research/namd/
Info: and send feedback or bug reports to namd_at_ks.uiuc.edu
Info:
Info: Please cite Phillips et al., J. Comp. Chem. 26:1781-1802 (2005)
Info: in all publications reporting results obtained with NAMD.
Info:
Info: Based on Charm++/Converse 60000 for mpi-linux-amd64-pgf90-mpicxx
Info: Built Tue May 5 12:36:23 BST 2009 by atg on reinette.lcn.ucl.ac.uk
Info: 1 NAMD 2.6 Linux-amd64-MPI 1 reinette.lcn.ucl.ac.uk acd
Info: Running on 1 processors.
Info: 1592 kB of memory in use.
Info: Memory usage based on mallinfo
Info: Changed directory to
/homes/acd/NAMD2.6/namd-tutorial-files/1-2-sphere
Info: Configuration file is ubq_ws_eq.conf
ERROR: Expecting value and optional units for option 'temperature'
ERROR: Expecting value and optional units for option 'langevinTemp'
ERROR: The following variables were set in the
ERROR: configuration file but are NOT VALID
ERROR: run
ERROR: reinitvels
ERROR: minimize
ERROR: set
FATAL ERROR: ERROR(S) IN THE CONFIGURATION FILE
p0_14453: p4_error: : 1
Thanks
Anna
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