From: Axel Kohlmeyer (
Date: Sat Aug 11 2007 - 12:51:55 CDT

On 8/11/07, gurpreet singh <> wrote:
> Hello VMD users

hello gurpreet,

> I want to use STRIDE the helper program of vmd for predicting the
> secondary structure of my protein.
> I am using it for the first time so i need some documentation where i can
> read about the usage of stride.
> I searched in net but i did not find anything.

well, you should search a little bit harder. ;-)

for example look at the VMD documentation where it
has the copyright notices.
where you can find an URL to the stride webpage.

also, every time VMD calls stride, it prints out a banner page on the
console with the reference citation.

that should get you started.


> Any help in this regard will be highly appreciated.
> waiting for your reply
> Thanks
> Gurpreet

Axel Kohlmeyer
  Center for Molecular Modeling   --   University of Pennsylvania
Department of Chemistry, 231 S.34th Street, Philadelphia, PA 19104-6323
tel: 1-215-898-1582,  fax: 1-215-573-6233,  office-tel: 1-215-898-5425
If you make something idiot-proof, the universe creates a better idiot.