VMD-L Mailing List

From: L. Michel Espinoza-Fonseca (mef_at_ddt.biochem.umn.edu)
Date: Fri Oct 12 2007 - 18:44:00 CDT

Hi Amit,

You can try out VEGA:

http://users.unimi.it/~ddl/vega/index2.htm

Cheers,
Michel

2007/10/12, Amit <amit1b_at_hotmail.com>:
>
> Hi,
> I'm looking for a way to work with small non-protein molecules like the
> hormone epinephrine or the drug acetaminophen, on VMD. I have a chemistry
> software that allows me to build such molecules from scratch and save them,
> but the format of the saved file is mopac (.mop), which VMD doesn't seem to
> recognize. Is there a free tool I can use to convert these files to
> something VMD can work with? Alternatively, is there a way of generating
> such small molecules with VMD?
> Cheers,
> Amit.
>
>
>
>
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