VMD-L Mailing List

From: aneesh cna (aneeshcna_at_gmail.com)
Date: Sat Nov 24 2007 - 22:50:51 CST

hi Peter,
    Thank you for kind reply.Actually I want to calculate the surface
hydrophobicity of a protein.

 with regadrs
Aneesh

On Nov 24, 2007 8:06 PM, Peter Freddolino <petefred_at_ks.uiuc.edu> wrote:
> Hi Aneesh,
> if you could be more specific about what you mean by "a hydrophobicity
> plot" we may be able to help; there are multiple definitions I can think
> of for what you may be looking for.
> Best,
> Peter
>
>
> aneesh cna wrote:
> > hello vmd users,
> > I would like to know whether there is any way to get a
> > hydrophobicity plot for a protein (with more than 200) residues using
> > VMD.
> >
> > with regards
> > Aneesh
> >
>