VMD-L Mailing List

From: Suman Chakrabarty (suman_at_sscu.iisc.ernet.in)
Date: Mon Oct 13 2008 - 13:09:53 CDT

Hi,

I want to color all of the atoms (bonds) of a polymer chain based on the
dihedral angle of each bond, e.g. for -C2-C3-C4-C5- portion, C2-C3 bond
will have one color if the dihedral angle is 60 degrees and another if
it is 180 degrees.

Is it possible to do so by any means?

Thanks,
Suman. 

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