From: Panagiota Georgoulia (
Date: Tue Oct 21 2008 - 09:07:35 CDT

I have already tried that but there are two issues:
1. the image is not exactly the one i am trying to make (i think i
should use glass/not tranparency)
2. after rendering the resolution of the transparency is a mess and so
i can not acquire a nice image

----- Μήνυμα από ---------
     Ημερομηνία: Tue, 21 Oct 2008 07:26:23 -0500
            Από: Peter Freddolino <>
           Θέμα: Re: vmd-l: volmap
           Προς: Panagiota Georgoulia <>

> You just need to load the .dx file into vmd, and then in the
> graphical representations menu change the material to transparent,
> Drawing method to isosurface, and Draw mode to Solid surface.
> Best,
> Peter
> Panagiota Georgoulia wrote:
>> Could someone elaborate on how to use the volumetric map generated
>> by the volmap plugin to make a transparent model of the solvent????

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