VMD-L Mailing List

From: Anirban Ghosh (anirbanz83_at_yahoo.co.in)
Date: Wed Nov 05 2008 - 04:48:32 CST

Hi ALL, In the previous post I mentioned that there was some error with "segname", while using the CG Map Tool of the new VMD test version. However I rectified that by making the segname of the modelled CG PDB and the segname of the all-atom PDB, same. But now I am getting the following error while I am trying to build the CG model for the entire 60 chain protein, using the CG Map Tool: ------------------------------------------------------------------------------------------------------------- can't read "cg_pos(0)": no such element in array can't read "cg_pos(0)": no such element in array while executing "vecadd $cg_pos($i_CG) [vecscale [lindex $AAmass $i] [lindex $AApos $i]" (procedure "::cgtools::mapCGMolecule" line 45) invoked from within "::cgtools::mapCGMolecule foobar $::cggui::currentMapAAMol $::cggui::currentMapCGMol $::cggui::currentMapRefMol $::cggui::mapOutpdbfile" (procedure "::cggui::mapSBExecute" line 19) invoked from within "::cggui::mapSBExecute" invoked from within ".cggui.mapSBFrame.applyDB invoke" ("uplevel" body line 1) invoked from within "uplevel #0 [list $w invoke]" (procedure "tk::ButtonUp" line 22) invoked from within "tk::ButtonUp .cggui.mapSBFrame.applyDB " (command bound to event) ------------------------------------------------------------------------------------------------------------------------------------------- Any suggestion to rectify this error is welcome. Regards, Anirban Ghosh M.Tech Bioinformatics University of Hyderabad Add more friends to your messenger and enjoy! Go to http://messenger.yahoo.com/invite/