VMD-L Mailing List
From: John Stone (johns_at_ks.uiuc.edu)
Date: Tue May 05 2009 - 09:24:32 CDT
- Next message: John Stone: "Re: VMD 1.8.7beta1 doesn't close OpenGL window"
- Previous message: 周文昌: "Satellite tobacco mosaic virus images making by VMD"
- In reply to: 周文昌: "Satellite tobacco mosaic virus images making by VMD"
- Next in thread: 周文昌: "Re: Satellite tobacco mosaic virus images making by VMD"
- Reply: 周文昌: "Re: Satellite tobacco mosaic virus images making by VMD"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]
Hi,
The water box for STMV was created with the "volmap" command
(or the GUI interface), with the "density" map type, if I recall.
The surface of the capsid was generated via MSMS one fragment at
a time, IIRC.
Cheers,
John Stone
vmd_at_ks.uiuc.edu
On Tue, May 05, 2009 at 09:31:33PM +0800, ?????? wrote:
> Dear all,
> Does anyone konw how to make images like STMV on VMD website?
> (http://www.ks.uiuc.edu/Gallery/Science/Structure/tn/cover_fig_st.jpg.html
> )
> I am very interested in making the water box and ions in this picture, which
> is beautiful and proteins can be seen clearly.
> Thank you.
>
> Best,
> Wenchang
-- NIH Resource for Macromolecular Modeling and Bioinformatics Beckman Institute for Advanced Science and Technology University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801 Email: johns_at_ks.uiuc.edu Phone: 217-244-3349 WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078
- Next message: John Stone: "Re: VMD 1.8.7beta1 doesn't close OpenGL window"
- Previous message: 周文昌: "Satellite tobacco mosaic virus images making by VMD"
- In reply to: 周文昌: "Satellite tobacco mosaic virus images making by VMD"
- Next in thread: 周文昌: "Re: Satellite tobacco mosaic virus images making by VMD"
- Reply: 周文昌: "Re: Satellite tobacco mosaic virus images making by VMD"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]