From: Axel Kohlmeyer (
Date: Wed Oct 21 2009 - 14:52:05 CDT

On Wed, Oct 21, 2009 at 3:03 PM, Arian Arian <> wrote:
> Hello
> I study about complex flows. I want to simulate a system that contains two or more kind of polymers and one solvent. I want to utilize VMD to:
> 1) Visualize the equlibrium state of the system.
> 2) Visualize the movement of particles by an appropriate film.
> I know the position of each particle and the existent bondings at each time step. Now, I want to know how can I prepare the input files for VMD with a suitable format.
> Please guide me, if it's possible for you.

please read the user's guide and please read and learn from the tutorials.
this way you learn about VMD's capabilities. it is impossible to give good
advice without you knowing the basics.

the list of supported file formats is given in the molfile plugin documentation:


> Kind regards
> Arian

Dr. Axel Kohlmeyer
Institute for Computational Molecular Science
College of Science and Technology
Temple University, Philadelphia PA, USA.