From: Pieter van 't Hof (
Date: Mon Nov 30 2009 - 07:56:47 CST


My name is Pieter van 't Hof. As part of my Master thesis in computer
science I am currently extending Gromacs and VMD to visualize short
range Lennard Jones potentials and Coulomb forces during interactive
molecular dynamics simulations. In order to choose a representation
method which is suitable for the most people, I designed a little survey
with 7 multiple choice questions.

If some of you (preferably people who use VMD mainly for
protein-ligand interactions) would fill-in this survey, it is greatly

The survey is located at

Thank you very much in advance.


Pieter van 't Hof
Utrecht University, The Netherlands

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