VMD-L Mailing List

From: Axel Kohlmeyer (akohlmey_at_gmail.com)
Date: Sun May 02 2010 - 15:08:54 CDT

On Sun, May 2, 2010 at 3:10 PM, Germain Vallverdu
<germain_vallverdu_at_yahoo.fr> wrote:
> Dear VMD users

dear germain,

> I am using anisotropic potential for ellipsoidal particles and I would
> like to find a way to vizualise configurations extrated from a dynamics
> with pymol. I would like to know if is it a way to do so with VMD ?

not directly. it would require some work in the internals of VMD.
not impossible (i've looked into it a while ago), but not trivial either.

a workaround would be to convert your ellipsoids into two atoms
with a bond and then use the licorice representation.

salut,
    axel.

>
> Thank you for your help
>
> Germain
>
>  - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
> Germain Salvato-Vallverdu
> post-doctorant CEA/DAM/DPTA/SPMC/LDDM
> 01 69 26 48 01
> PagePerso : http://germain.salvato-vallverdu.perso.sfr.fr
>
>
>
>
>
> 

-- 
Dr. Axel Kohlmeyer    akohlmey_at_gmail.com
http://sites.google.com/site/akohlmey/
Institute for Computational Molecular Science
Temple University, Philadelphia PA, USA.