VMD-L Mailing List
From: Rabab Toubar (rtoubar_at_yahoo.com)
Date: Wed Jun 16 2010 - 07:21:00 CDT
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Hi
I have ~ 3 GB GMX .trr trajectory file and I canno load all of it due to memory so I use stride. I want to save the whole trajectory without striding it. For NAMD trajectories I know I can use the following tcl script
mol load psf pr.psf
animate read dcd pr.dcd
[atomselect top all] writedcd pr.dcd
But for GMX - where I use pdb and trr files instead of psf and dcd - how can I do it
Thanks
Rabab
- Next message: Harold Hatch: "solvate nonstandard patch error"
- Previous message: Peter Freddolino: "Re: AutoPSF deleting residues"
- In reply to: Axel Kohlmeyer: "Re: topotools"
- Next in thread: John Stone: "Re: saving a GMX trajectory using tcl script"
- Reply: John Stone: "Re: saving a GMX trajectory using tcl script"
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