From: Axel Kohlmeyer (
Date: Fri Aug 20 2010 - 12:13:21 CDT

On Fri, Aug 20, 2010 at 12:22 PM, hirdesh kumar <> wrote:
> Hi All,
> I have the AMBER files in .crd and .parm7 format and I am looking forward to
> calculate the rms fluctuation residue wise during the entire run.. Please
> tell me how can I calculate the rmsf using VMD1.8.7 version.

please tell us which part of the documentation is not clear to you?


> Thanks in advance,
> Hirdesh

Dr. Axel Kohlmeyer
Institute for Computational Molecular Science
Temple University, Philadelphia PA, USA.