VMD-L Mailing List

From: Murpholino Peligro (murpholinox_at_gmail.com)
Date: Thu Sep 16 2010 - 15:31:58 CDT

Is there any way to make the salt-bridge analysis frame by frame with bigdcd?
I was experimenting with a petite trajectory and
measure contacts
and measure bond
but i want selections per residues...not atoms
like
atomselect macro acidic "resname ASP GLU"
atomselect macro acidic "resname ARG HIS LYS HSP"
.
.
I try to do something like the distance.tcl.. from
http://www.ks.uiuc.edu/Training/Tutorials/vmd/tutorial-html/node7.html
but....the problem is that the trajectory size is ~9 Gb..

thanks :) 

-- 
Mr. Murpholino X
"mi segundo nombre es Peligro!!"