VMD-L Mailing List

From: JC Gumbart (gumbart_at_ks.uiuc.edu)
Date: Thu Oct 07 2010 - 23:14:10 CDT

I guess it's similar to a peptide bond, so you could use the LINK patch as a
starting point...

-----Original Message-----
From: owner-vmd-l_at_ks.uiuc.edu [mailto:owner-vmd-l_at_ks.uiuc.edu] On Behalf Of
Al-Ali, Hassan
Sent: Thursday, October 07, 2010 10:33 PM
To: vmd-l_at_ks.uiuc.edu
Subject: vmd-l: Ubiquitin - patch?

What patching scheme should I use to connect the C terminus of a ubiquitin
molecule to the NZ atom of a lysine residue?

Thanks in advance!