VMD-L Mailing List
From: Vlad Cojocaru (vlad.cojocaru_at_mpi-muenster.mpg.de)
Date: Sun May 29 2011 - 14:53:11 CDT
- Next message: BRAULIO VALDEBENITO MATURANA: "Re: Protein cavities"
- Previous message: Axel Kohlmeyer: "Re: Save Coordinates for Multiple Loads"
- In reply to: Qmer_AN?=: "Save Coordinates for Multiple Loads"
- Next in thread: Vlad Cojocaru: "Re: Save Coordinates for Multiple Loads"
- Reply: Vlad Cojocaru: "Re: Save Coordinates for Multiple Loads"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]
Oemer,
You have 2 solutions:
1) save each molecule separately and cat them together in the shel
2) Write a small script such as
set file [ open filename w]
set a [ writepdb [ atomselect $molid1 all ] ]
set b [ writepdb [ atomselect $molid2 all ] ]
puts $file "$a"
puts $file "$b"
and run it as "vmd -e $script"
Vlad
On 29.05.2011 16:14, Ömer AN wrote:
> Hi,
> Is there any option to "Save Coordinates" of all loaded molecules at
> once, preferably merged in a single pdb file if possible?
-- Dr. Vlad Cojocaru Max Planck Institute for Molecular Biomedicine Department of Cellular and Developmental Biology Roentgenstrasse 20 48149 Muenster, Germany tel: +49-251-70365-324 fax: +49-251-70365-399 email: vlad.cojocaru[at]mpi-muenster.mpg.de
- Next message: BRAULIO VALDEBENITO MATURANA: "Re: Protein cavities"
- Previous message: Axel Kohlmeyer: "Re: Save Coordinates for Multiple Loads"
- In reply to: Qmer_AN?=: "Save Coordinates for Multiple Loads"
- Next in thread: Vlad Cojocaru: "Re: Save Coordinates for Multiple Loads"
- Reply: Vlad Cojocaru: "Re: Save Coordinates for Multiple Loads"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]