VMD-L Mailing List

From: Matthew C. Lee (mattlee_at_udel.edu)
Date: Fri Sep 05 2003 - 13:57:42 CDT

Hi,

I am trying to measure the angles between the major axies of two helices within the same protein throughout a MD trajectory and somewhere in the back of my mind, I remember having seen a script to do this under VMD but I can't find it anywhere in the documentation. Does anyone have a script that I can look at?

Thanks.

Matthew Lee
Graduate Research Assistant
Department of Chemistry & Biochemistry
University of Delaware
Newark, DE 19716