VMD-L Mailing List

From: winardi, erik (egw24_at_yahoo.com)
Date: Mon Feb 20 2012 - 05:15:05 CST

Hi VMD users,  I am wondering how VMD automatically create the bond in between the atom for .xyz input file data.  Are VMD using some cut-off distance approximation for it ? I open the .xyz, they only have information for the atom type and coordinate only.   Thanks,  Erik Winardi