From: John Stone (
Date: Mon Mar 12 2012 - 16:43:21 CDT

  Thanks for the followup. What was it in the PDB structure that
was causing the problem? This would be helpful to know for future reference.

  John Stone

On Mon, Mar 12, 2012 at 10:18:11PM +0100, Albert wrote:
> Hi John:
> thank you very much for kind messages.
> I tried many other cases, and they works fine. And the problem comes
> from the PDB file I used because there are some errors in the structure.
> After I fix it, everything goes well.
> best
> Albert
> On 03/12/2012 09:44 PM, John Stone wrote:
> >Albert,
> > Can you zip or tar up all of the files needed to reproduce the problem
> >and send a copy to Michal (the propka GUI author) and myself? I'm CCing
> >Michal on this email so he is aware of the discussion before you send
> >us the files.
> >
> >Michal, let us know if you need additional information.
> >
> >Cheers,
> > John Stone
> >

NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801           Phone: 217-244-3349       Fax: 217-244-6078