VMD-L Mailing List
From: mohammad agha (mra_bu_at_yahoo.com)
Date: Thu Dec 06 2012 - 05:19:08 CST
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Thanks from your response.
Best Regards
Sara
----- Original Message -----
From: Axel Kohlmeyer <akohlmey_at_gmail.com>
To: mohammad agha <mra_bu_at_yahoo.com>
Cc: "vmd-l_at_ks.uiuc.edu" <vmd-l_at_ks.uiuc.edu>
Sent: Thursday, December 6, 2012 1:14 PM
Subject: Re: vmd-l: uninstall of previous version
On Thu, Dec 6, 2012 at 9:40 AM, mohammad agha <mra_bu_at_yahoo.com> wrote:
> Dear Axel,
>
> Many thanks from your response.
> Before you answer me, I try to alter of VMD version from 1.8.6 to 1.9.1, but the previous version is not removed!!!
> I went to /usr/local/bin and remove the vmd, but when I try to install of new version, the steps of installation are good, but when I type "./vmd", vmd_1.8.6 is opened and it doesn't work.
"it doesn't work" is a problem description
where next to nobody can help with.
> Please help me.
sorry, but my crystal ball doesn't work anymore
and i don't have the second sight to see what
exactly you have done or not or done wrongly.
if you do things correctly, it will work.
the installation guide explains that VMD
installs in two locations (wrapper script
and library) and - of course - you need
to remove both and you need to make
sure that there is nothing else colliding
with the installation and no errors/warnings.
axel.
> Best Regards
> Sara
>
>
>
> ----- Original Message -----
> From: Axel Kohlmeyer <akohlmey_at_gmail.com>
> To: mohammad agha <mra_bu_at_yahoo.com>
> Cc: "vmd-l_at_ks.uiuc.edu" <vmd-l_at_ks.uiuc.edu>
> Sent: Thursday, December 6, 2012 11:59 AM
> Subject: Re: vmd-l: invalid command name "dict"
>
> On Thu, Dec 6, 2012 at 8:26 AM, mohammad agha <mra_bu_at_yahoo.com> wrote:
>> Dear VMD Specialists,
>>
>> I want to use "cg_bonds.tcl" script to view my system in VMD that my force field is MARTINI.
>> When I type cg_bands -gmx /usr/local/bin/gmxdump -tpr x.tpr, it said "invalid command name "dict"".
>> May I ask you to help me, Please?
>
> how???
>
> there is no cg_bonds.tcl script in VMD.
> you have to contact whoever wrote it.
>
> axel.
>
>
>>
>> Best Regards
>> Sara
>>
>
>
>
> --
> Dr. Axel Kohlmeyer akohlmey_at_gmail.com http://goo.gl/1wk0
> International Centre for Theoretical Physics, Trieste. Italy.
>
>
-- Dr. Axel Kohlmeyer akohlmey_at_gmail.com http://goo.gl/1wk0 International Centre for Theoretical Physics, Trieste. Italy.
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