VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Wed Feb 27 2013 - 10:22:00 CST

Hi,
  There isn't a built-in feature for this, but there should be many other
tools out there that can do such a calculation. I would suggest looking
at the Gromacs suite and see if they have an analysis program that can
do that calculation.

Cheers,
  John

On Tue, Feb 26, 2013 at 12:49:10PM +0530, Sindrila Dutta Banik wrote:
> Dear all,
>
> I have a question regarding B-factor. Can I compute B-factor from the
> trajectory using VMD?
>
> Please let me know.
>
> With best regards
> sindrila
> --
> Sindrila Dutta Banik
> C/O Prof. A. Chandra
> Project Scientist
> Department of Chemistry
> IIT Kanpur
> UP 208016 

-- 
NIH Center for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
http://www.ks.uiuc.edu/~johns/           Phone: 217-244-3349
http://www.ks.uiuc.edu/Research/vmd/       Fax: 217-244-6078