VMD-L Mailing List

From: Francesco Pietra (chiendarret_at_gmail.com)
Date: Fri Jul 12 2013 - 05:14:50 CDT

Hello:
Is anywhere around equilibrated membrane popc_n256.psf .pdb in XPLOR
format rather than charmm format? The latter, from charmm
repositories, are read by VMD but refused by

vmd -dispdev text < combine.tcl | tee combine.log (combine.tcl as
available with VMD membrane plugin)

I was unable to do the charmm/namd file conversion with charmm2namd
python script (http://www.ks.uiuc.edu/Research/namd/wiki/?NamdAndCHARMM)

Thanks for help

francesco pietra