From: Daniel.Mulvihill (Daniel.Mulvihill_at_ul.ie)
Date: Wed Sep 11 2013 - 10:26:55 CDT

Thanks John,

Indeed I had installed 2 versions in the same directory and that must
have caused the problems.

Daniel

-----Original Message-----
From: John Stone [mailto:johns_at_ks.uiuc.edu]
Sent: 11 September 2013 14:48
To: Daniel.Mulvihill
Cc: vmd-l_at_ks.uiuc.edu; akohlmey_at_gmail.com
Subject: Re: vmd-l: Problems uploading new molecule

Hi,
  It sounds to me like you may have installed VMD versions on top of
each other. You have to be very careful when installing VMD not to
install multiple versions in the same directory, or all kinds of
problems could occur. I would suggest that you uninstall all versions
_first_ and then install just 1.9.1 and see if that works or not.
If you have trouble with 1.9.1, then I would double check that your
download didn't get corrupted, and that you didn't get any errors during
installation. That should clear up your problems.

Cheers,
  John Stone

On Wed, Sep 11, 2013 at 11:11:56AM +0100, Daniel.Mulvihill wrote:
> Thanks Axel,
>
> I had 1.8.6 installed first. Then I installed 1.9.1. But somehow that

> caused the problem - when I uninstalled 1.9.1 the loading of a
> molecule worked fine in 1.8.6.
> I'd prefer to use the new version though but just in case I run into
> this problem again I'm inclined to leave it alone.
>
> Daniel
>
> -----Original Message-----
> From: Axel Kohlmeyer [mailto:akohlmey_at_gmail.com]
> Sent: 11 September 2013 10:03
> To: Daniel.Mulvihill
> Cc: Vmd l
> Subject: Re: vmd-l: Problems uploading new molecule
>
> On Tue, Sep 10, 2013 at 5:22 PM, Daniel.Mulvihill
> <Daniel.Mulvihill_at_ul.ie> wrote:
> > Hi VMD guys
> >
> >
> >
> > I just downloaded VMD to help with my MD research.
> >
> > When I try loading a new molecule (the mbco.pdb file), I get the
> > message "please select a filetype"
>
> > But it will not allow me to select a file type other than
"Automatic"
> >
> > So I can't upload anything. I would be grateful to know what I'm
> doing
> > wrong?
>
> upload?
>
> i would be grateful, if i was able to tell you what you are doing
> wrong, but how should i know?
> it works for me. have a closer look at the VMD user's guide. many,
> many people have learned to use VMD from it without running into the
> problem that you are reporting. so there is hope you will be able to
as well.
>
> axel.
>
> >
> >
> >
> > Daniel
> >
> >
> >
> >
> >
> >
>
........................................................................
> ..................................................
> >
> > Daniel Mulvihill
> >
> > Government of Ireland Research Fellow,
> >
> > Department of Mechanical, Aeronautical, and Biomedical Enginering,
> >
> > University of Limerick
> >
> >
>
>
>
> --
> Dr. Axel Kohlmeyer akohlmey_at_gmail.com http://goo.gl/1wk0
> International Centre for Theoretical Physics, Trieste. Italy.

--
NIH Center for Macromolecular Modeling and Bioinformatics Beckman
Institute for Advanced Science and Technology University of Illinois,
405 N. Mathews Ave, Urbana, IL 61801
http://www.ks.uiuc.edu/~johns/           Phone: 217-244-3349
http://www.ks.uiuc.edu/Research/vmd/