From: Ramin Ekhteiari (
Date: Wed Nov 06 2013 - 02:56:43 CST

Hi dears,

I did a MD simulation for my system by employing NAMD code and got dcd and other output files, but now I am trying to do a MM-PBSA calculation for this system, so can someone advise me on how to do these calculation via vmd?

Would be grateful for any advice.