From: Arham Amouie (
Date: Wed Feb 12 2014 - 13:22:40 CST


I've written a MD code for EAM potentials. The typical number of atoms is of the order of 1 million. This code saves the positions in xyz files and I use VMD for visualization. Now, I'm going to change the output, so that each atom can have its particular color. I used csv format of ParaView for this reason, but ParaView doesn't work fast for me. What is the easiest solution in VMD?

Thanks in advance
Arham Amouei