From: Vasumathi Velachi (
Date: Fri Sep 19 2014 - 04:34:21 CDT

Dear All
I would like to calculate hydrogen bond between water molecule in
particular region, if it is not particular region i can use Hbonds
plugin. So I tried by using measure hbonds 3.5 30 $sel1 $sel2 command
in tcl script, but it gives indices list not total number of hbonds. Is
there anyway to get total number or did I missed something?

Thanking you in advance

Vasumathi Velachi