VMD-L Mailing List
From: Jevgenij Raskatov (jraskato_at_ucsc.edu)
Date: Mon Feb 02 2015 - 20:15:45 CST
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Dear users,
I would like to introduce chirality inversions (i.e. L- to D- amino acid
mutation) into a protein. Does anyone have any recommendation on how to do
it?
So far, I attempted using the following instructions
http://www.ks.uiuc.edu/Training/Tutorials/science/topology/topology-html/node4.html
However, the resultant non-natural amino acid *DAL* is not recognized by
vmd when I load the topology file
I would be very grateful for suggestions
Many thanks in advance
Jevgenij
-- Dr. Jevgenij A. Raskatov Assistant Professor in Chemistry and Biochemistry Tel.: +1-831-459-2978 Department of Chemistry and Biochemistry Physical Science Building 356 1156 High Street Santa Cruz, CA 95064 USA
- Next message: M K: "Re: Unit Cell PDB of Copper"
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- Reply: Josh Vermaas: "Re:"
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