From: Norman Geist (
Date: Wed Jan 27 2016 - 03:12:33 CST

Sry, try


set files “file1.pdb file2.pdb file3.pdb”

foreach f $files {

               set mid [mol new $f]

               set sel [atomselect $mid all]

               $sel writerst7 “${f}.rst7”

               $sel delete

               mol delete $mid



Good luck


Norman Geist


Von: [] Im Auftrag von Akshay Bhatnagar
Gesendet: Mittwoch, 27. Januar 2016 05:40
Betreff: vmd-l: tcl command to write amber format files




Is there a command in TCL through which i can convert pdb files to amber format through console as i want to do it for multiple files

With Regards

Akshay Bhatnagar

PhD Student

BITS Pilani Hyderabad Campus