VMD-L Mailing List

From: Ajasja Ljubetič (ajasja.ljubetic_at_gmail.com)
Date: Fri Sep 01 2017 - 06:34:59 CDT

Hi!

You're not giving a whole lot of details, so my advice will be generic as
well. Usually I split my trajectories into 1 ns chunks and then I use gnu
parallel <https://www.gnu.org/software/parallel/> to run analysis scripts
in parallel.

If you mean the parallel tcl command
<http://www.ks.uiuc.edu/Research/vmd/current/ug/node144.html> you have to
compile VMD with MPI support and have MPI installed. But I guess this is
meant for large clusters of computers not just a four core processor (or
two, in case of hyper-threading).

Best,
Ajasja

On 1 September 2017 at 12:59, Saikat Pal <saikatpaliitg_at_remove_yahoo.com>
wrote:

> Dear all,
>
> I want o install VMD IN parallel to analysis data.What should I do ??I
> have already installed VMD in serial mode .In my computer there are 4
> processors are available.Please help me out .
>
> Thanks And Regards,
>
> Saikat
>