VMD-L Mailing List
From: Giacomo Fiorin (giacomo.fiorin_at_gmail.com)
Date: Wed Sep 13 2017 - 14:04:46 CDT
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I would look into using the withinbonds keyword that Josh mentioned a few
days ago.
On Wed, Sep 13, 2017 at 1:39 PM, Karteek Kumar <karthik3327_at_gmail.com>
wrote:
> Hi,
>
> Use a different name for polar hydrogen you want. Make a representation
> for those atoms (something like "name Hp")
>
> Hope this helps.
>
> Karteek
>
> On Wed, Sep 13, 2017 at 1:07 PM, Albers, Thomas <TALBERS_at_augusta.edu>
> wrote:
>
>> Hello!
>>
>>
>> Is there any keyword in VMD that selects polar hydrogens (i.e. those
>> bound to N, O and possibly S)?
>>
>>
>> Regards,
>>
>> Thomas
>>
>>
>>
>>
>
-- Giacomo Fiorin Associate Professor of Research, Temple University, Philadelphia, PA Contractor, National Institutes of Health, Bethesda, MD http://goo.gl/Q3TBQU https://github.com/giacomofiorin
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- In reply to: Karteek Kumar: "Re: polar hydrogens"
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- Reply: Albers, Thomas: "Re: [EXTERNAL] Re: polar hydrogens"
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