VMD-L Mailing List

From: melika_ bm85 (melika_bm85_at_REMOVE_yahoo.com)
Date: Sun Oct 15 2017 - 09:29:56 CDT

Thank you so much everyone for your help.
I managed to find it and it was so silly of me not to have seen it before. But once I uploaded my trajectory and asked it to calculate g(r), I got the error message: ERROR) measure gofr: only orthorhombic cells are supported (for now).
Could anyone tell me what is wrong now? I did search about this error but did not understand why it happens.
Thanks so much again,
Melika
--------------------------------------------
On Sun, 15/10/17, Axel Kohlmeyer <akohlmey_at_gmail.com> wrote:

 Subject: Re: vmd-l: calculate g(r)
 To: "melika_ bm85" <melika_bm85_at_yahoo.com>
 Cc: "Vmd l" <vmd-l_at_ks.uiuc.edu>
 Date: Sunday, 15 October, 2017, 15:30
 
 On Sun, Oct 15, 2017 at 6:49 AM,
 melika_ bm85
 <melika_bm85_at_remove_yahoo.com>
 wrote:
> Dear Users,
>
 I want to calculate RDF in VMD and as I realized I must
 first get the g(r) GUI plugin
 
 this is nonsense. you don't need the GUI
 plugin. the plugin is only a
 frontend for
 the measure gofr / measure rdf (text mode) commands. it
 says so in the first paragraph of its
 documentation:
 http://www.ks.uiuc.edu/Research/vmd/plugins/gofrgui/
 
> but I don't know how
 to do it. I searched but I couldn't find any way to
 download or install it.
 
 it
 is already bundled with VMD (and has been since its
 conception
 many, many years ago).
 
 axel.
 
> Sincerely,
> Melika
 Vokhshoori
>
 
 
 
 --
 Dr. Axel Kohlmeyer  akohlmey_at_gmail.com 
 http://goo.gl/1wk0
 College of Science & Technology, Temple
 University, Philadelphia PA, USA
 International Centre for Theoretical Physics,
 Trieste. Italy.