VMD-L Mailing List

From: Francesco Pietra (chiendarret_at_gmail.com)
Date: Sun Jun 24 2018 - 03:29:24 CDT

solved fp

On Sat, Jun 23, 2018 at 6:46 PM, Francesco Pietra <chiendarret_at_gmail.com>
wrote:

> From a system TIP3-solvated in a periodic box, I am trying to obtain the
> .psf for only the protein and one of the ligands.
>
> Loaded the solvated .psf into vmd, from tk console:
>
> % set sel [atomselect top "segname PROB or segname GDPB"]
>>
>> $sel writepsf protein-GDP.psf
>>
>> frame -1 out of range for molecule 0
>>
>
>
> I have noticed this type of error on the vmd list but I can't find a
> solution here.
>
> thanks for advice
>
> francesco pietra
>
>
>