From: Angana Ray (
Date: Fri Apr 12 2019 - 17:44:45 CDT


I am currently simulations a complex containing protein, dsDNA and RNA. The
trajectory is generated in Anton2. I would like to visualize and analyze
the the trajectory with VMD.

Due PBC the nucleic acid part appears to be away from the protein in VMD
visualization. I want to unwrap the system such that my complex has the
protein, DNA and RNA together. The pbc unwarp -sel is not working for this.

I am attaching two files here (.dms and .trr). Please let me know how this
can be sorted .

Thank you


Angana Ray
Postdoctoral Scholar - Research Associate
University of Southern California
Mobile: +1-2132840728