VMD-L Mailing List
From: Amir Suhail (amirsuhail029_at_gmail.com)
Date: Thu Oct 03 2019 - 05:27:35 CDT
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Hi all,
I selected my molecule and used writepdb to convert .coor to pdb file but
vmd is giving following error :-
PDB WRITE ERROR: Position, occupancy, or b-factor (beta) for atom 0
cannot be written in PDB format.
File will be truncated.
This has been discussed in mailing list :-
https://www.ks.uiuc.edu/Research/vmd/mailing_list/vmd-l/14674.html
I shifted the origin to center of mass and set occupancy and beta to zero
according to answer in above link but still I am getting writepdb failed
error.
Thanks in advance,
-Amir
- Next message: Vermaas, Joshua: "RE: NAMD .coor file to pdb, WRITE PDB ERROR."
- Previous message: Madhur Aggarwal: "Re: lammps data file simulation box center and VMD origin"
- Next in thread: Vermaas, Joshua: "RE: NAMD .coor file to pdb, WRITE PDB ERROR."
- Reply: Vermaas, Joshua: "RE: NAMD .coor file to pdb, WRITE PDB ERROR."
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